Agent Skills
› brycewang-stanford/Awesome-Journal-Skills
› soil-biology-and-biochemistry
soil-biology-and-biochemistry
GitHub用于评估土壤生物学与生物化学稿件是否契合该期刊，聚焦土壤过程机制而非描述性数据。提供选题定位、方法证据标准、拒稿启发式规则及替代投稿建议，辅助作者进行稿件适配与重构。
Trigger Scenarios
作者提名SBB并需检查土壤过程或微生物论文的契合度
微生物群落或土壤碳数据集需围绕过程机制重新构建
在SBB、农业生态系统环境及其他生物地球化学期刊间选择
需要SBB的拒稿启发式规则及可行的替代投稿路径
Install
npx skills add brycewang-stanford/Awesome-Journal-Skills --skill soil-biology-and-biochemistry -g -y
SKILL.md
Frontmatter
{
"name": "soil-biology-and-biochemistry",
"description": "Use when targeting Soil Biology & Biochemistry or deciding whether a soil-science manuscript fits this venue. Encodes the journal's fit, the soil-process-mechanism bar, evidence and data-reporting expectations, house style, official-submission re-check, and desk-reject heuristics."
}
Soil Biology & Biochemistry (soil-biology-and-biochemistry)
Journal positioning
Soil Biology & Biochemistry (SBB), published by Elsevier, is the leading journal for the mechanisms of soil biological and biochemical processes: soil organic matter dynamics, microbial ecology and function, nutrient cycling, soil carbon, extracellular enzymes, and the biogeochemical processes that soil biota drive. Its defining expectation is mechanistic process understanding — evidence about how soil organisms and reactions govern a process, not a descriptive inventory of what is present. A soil survey, a descriptive community census with no process link, or a management trial whose contribution is an agronomic outcome rather than a soil mechanism is a poor fit. This skill is a fit / venue-selection / re-framing tool. It does not replace the journal's current author guidelines. Before submitting, re-check the live SBB author guidance.
When to trigger
- The author names SBB and wants a fit/framing check for a soil-process or soil-microbial paper.
- A microbial-community or soil-carbon dataset must be re-framed around the process mechanism it explains rather than a description of community composition.
- The author is choosing between SBB,
agriculture-ecosystems-and-environment(agroecosystem environmental outcomes), and a broader biogeochemistry venue. - The author needs SBB's desk-reject heuristics and a credible alternative route.
Scope & topic fit
- Soil organic matter formation, stabilization, and decomposition, and the controls on soil carbon persistence.
- Soil microbial ecology and function: community assembly, activity, and the links between diversity and process rates.
- Nutrient cycling and transformations (C, N, P, S) and the microbial/enzymatic mechanisms behind them.
- Extracellular enzymes, microbial physiology, and carbon/nutrient-use efficiency as process drivers.
- Soil fauna, the soil microbiome, and biotic interactions where they mechanistically shape soil processes.
- Rhizosphere and root–soil–microbe interactions framed around process mechanism.
Method & evidence bar
- The central claim must be a soil-process mechanism: evidence that links soil biota or reactions to a measured process rate or pool change, not co-occurrence or description.
- Microbial-community data must be tied to function (rates, isotopes, enzyme activity, gene expression), not presented as composition alone; '-omics' needs process-level interpretation.
- Incubation and field studies need adequate replication, appropriate controls, and statistics that respect spatial/temporal structure; isotope and tracer work needs proper mass balance.
- Process rates and pools require validated methods, reported detection limits/uncertainty, and reproducible analytical protocols.
- Sequence data must be deposited with accessions; data and code underpinning the process conclusions should be available per Elsevier policy.
Structure & house style
- Standard IMRaD; the introduction must state the soil-process question and the mechanistic gap, not just the study site or community of interest.
- Methods must document soil properties, sampling design, and analytical/incubation protocols in reproducible detail.
- Figures should make the mechanism visible (rate–driver relationships, isotopic partitioning, enzyme/process links) with variability and controls shown.
- A data-availability statement, sequence accessions, and complete soil metadata are expected; supplementary material carries analytical detail.
Official-submission checklist
- Before giving submission-ready advice, read
../../resources/source-basis.mdand../../resources/official-source-map.md; start from the official source anchors, then cite the current Soil Biology & Biochemistry page you checked. - Search the live site for "Soil Biology & Biochemistry guide for authors" and follow the current Elsevier version.
- Re-check article types, structure, word/figure expectations, and abstract format.
- Confirm sequence-data deposition/accession requirements and the data-availability policy.
- Re-check competing-interests, funding, author-contribution, and AI-use disclosure, and open-access terms.
- If the live official instructions conflict with this skill, the official instructions win.
Pre-submission self-check
- The central contribution is a soil-process mechanism, not a descriptive inventory.
- Microbial-community data are tied to function (rates, isotopes, enzymes, expression).
- Replication, controls, and statistics respect spatial/temporal structure; mass balance holds.
- Process rates/pools use validated methods with reported uncertainty and detection limits.
- Sequence accessions and a data-availability statement are prepared.
- Soil metadata and analytical protocols are documented for reproducibility.
Common desk-reject triggers
- A descriptive soil survey or community census with no process mechanism.
- Microbial composition reported with no link to a measured process or function.
- '-omics' catalogues with no process-level interpretation or validation.
- Under-replicated or pseudoreplicated incubations/field studies presented as general.
- A management trial whose real contribution is an agronomic outcome, not a soil mechanism.
Re-routing decision
- Agroecosystem environmental outcomes (GHG, nutrient losses, biodiversity) at field-landscape scale →
agriculture-ecosystems-and-environment. - Crop yield/agronomy and resource-use efficiency is the core →
field-crops-research. - Sustainability-framed soil/cropping-system synthesis or meta-analysis →
agronomy-for-sustainable-development. - Large-scale climate/global-change soil-carbon process dominant →
global-change-biology. - Broad, headline biogeochemistry significance →
nature-communicationsor a global-biogeochemistry venue.
Output format
[Fit] High / Medium / Low (one-line reason)
[Target] Soil Biology & Biochemistry
[Topic tags] <2–3 closest soil-process topics>
[Process mechanism] <the soil biota/reaction → process-rate/pool link being established>
[Method/evidence] <does function-linkage + replication + method rigor clear SBB's bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / sequence deposition / data policy / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>
Version History
- 1839142 Current 2026-07-05 12:18
