Agent Skills
› openai/plugins
› chembl-skill
chembl-skill
GitHub用于提交紧凑的 ChEMBL API 请求，获取活性、分子、靶点、机制及文本搜索数据。通过脚本执行并返回简洁摘要，支持按路径和参数定制查询，适用于需要简明化学信息总结的场景。
Trigger Scenarios
用户请求查找特定分子的活性数据
用户需要搜索与某药物相关的靶点或机制
用户希望获取 ChEMBL 数据库中的化合物搜索结果
Install
npx skills add openai/plugins --skill chembl-skill -g -y
SKILL.md
Frontmatter
{
"name": "chembl-skill",
"description": "Submit compact ChEMBL API requests for activity, molecule, target, mechanism, and text-search endpoints. Use when a user wants concise ChEMBL summaries"
}
Operating rules
- Use
scripts/rest_request.pyfor all ChEMBL API calls. - Use
base_url=https://www.ebi.ac.uk/chembl/api/data. - The script accepts
max_items; for activity, mechanism, and text-search collections, start with APIlimit=10andmax_items=10. - Single molecule or target lookups usually do not need
max_items. - Re-run requests in long conversations instead of relying on older tool output.
- Treat displayed
...in tool previews as UI truncation, not literal request content.
Execution behavior
- Return concise markdown summaries from the script JSON by default.
- Return the script JSON verbatim only if the user explicitly asks for machine-readable output.
- Prefer these paths:
activity.json,molecule/<id>.json,target/<id>.json,mechanism.json, andmolecule/search.json. - Use
record_pathto target list fields likeactivities,mechanisms, ormolecules.
Input
- Read one JSON object from stdin.
- Required fields:
base_url,path - Optional fields:
method,params,headers,json_body,form_body,record_path,response_format,max_items,max_depth,timeout_sec,save_raw,raw_output_path - Common ChEMBL patterns:
{"base_url":"https://www.ebi.ac.uk/chembl/api/data","path":"activity.json","params":{"molecule_chembl_id":"CHEMBL25","limit":10},"record_path":"activities","max_items":10}{"base_url":"https://www.ebi.ac.uk/chembl/api/data","path":"molecule/CHEMBL25.json"}{"base_url":"https://www.ebi.ac.uk/chembl/api/data","path":"molecule/search.json","params":{"q":"imatinib","limit":10},"record_path":"molecules","max_items":10}
Output
- Success returns
ok,source,path,method,status_code,warnings, and either compactrecordsor a compactsummary. - Use
raw_output_pathwhensave_raw=true. - Failure returns
ok=falsewitherror.codeanderror.message.
Execution
echo '{"base_url":"https://www.ebi.ac.uk/chembl/api/data","path":"activity.json","params":{"molecule_chembl_id":"CHEMBL25","limit":10},"record_path":"activities","max_items":10}' | python scripts/rest_request.py
References
- No additional runtime references are required; keep the import package limited to this file and
scripts/rest_request.py.
Version History
- 11c74d6 Current 2026-07-19 09:37
