Agent Skillsmaziyarpanahi/openmed › deidentifying-multilingual-text

deidentifying-multilingual-text

GitHub

在本地对多语言临床文本进行去标识化,支持西、德、法等多种语言。自动选择对应PII模型和正则模式(如各国身份证号),生成符合本地习惯的假名,并处理口音归一化与区域方言变体。

skills/deidentifying-multilingual-text/SKILL.md maziyarpanahi/openmed

Trigger Scenarios

需要去除非英语医疗记录中的个人身份信息 要求生成的替代数据符合特定国家或地区的格式规范 询问OpenMed支持哪些语言的PII检测

Install

npx skills add maziyarpanahi/openmed --skill deidentifying-multilingual-text -g -y
More Options

Use without installing

npx skills use maziyarpanahi/openmed@deidentifying-multilingual-text

指定 Agent (Claude Code)

npx skills add maziyarpanahi/openmed --skill deidentifying-multilingual-text -a claude-code -g -y

安装 repo 全部 skill

npx skills add maziyarpanahi/openmed --all -g -y

预览 repo 内 skill

npx skills add maziyarpanahi/openmed --list

SKILL.md

Frontmatter
{
    "name": "deidentifying-multilingual-text",
    "license": "Apache-2.0",
    "metadata": {
        "pairs": "adjacent",
        "project": "OpenMed",
        "version": "1.0",
        "category": "de-identification"
    },
    "description": "De-identify non-English clinical text on-device with OpenMed by passing lang= and locale= to deidentify(). Use when the user has Spanish, German, French, Italian, Portuguese, Dutch, Hindi, Telugu, Arabic, Japanese, or Turkish medical notes, needs locale-aware fake surrogates, must handle language-specific national IDs (DNI, NIR, Steuer-ID, codice fiscale, BSN, CPF, TCKN, Aadhaar), or asks which languages OpenMed PII supports. Covers SUPPORTED_LANGUAGES, get_pii_models_by_language, get_patterns_for_language, LANG_TO_LOCALE, and accent normalization. Pairs with OpenMed deidentifying-clinical-text and generating-synthetic-surrogates."
}

De-identifying multilingual text

OpenMed de-identifies clinical text in many languages, each with a dedicated PII model, language-specific regex patterns (national IDs, phone formats), and a locale-aware surrogate generator. Pass lang= to deidentify / extract_pii and the right model, patterns, and fake-data tables are selected automatically. Everything runs on-device.

When to use this skill

Use it whenever the source text is not English, or when surrogates must look native to the locale (a German note should get German-looking fake names and a valid-format Steuer-ID surrogate, not a US SSN).

Discover supported languages at runtime — don't hardcode

import openmed
from openmed.core.pii_i18n import SUPPORTED_LANGUAGES, get_patterns_for_language

print(sorted(SUPPORTED_LANGUAGES))   # query it; the set is the source of truth
# Language-appropriate default model for a code:
models = openmed.get_pii_models_by_language("es")
# Language-specific regex patterns (national IDs, phones, etc.):
patterns = get_patterns_for_language("de")

The set currently spans English plus European, South Asian, Middle Eastern, and East Asian languages — but always read SUPPORTED_LANGUAGES rather than trusting a number, since it changes as models ship. MCP exposes the same list via openmed_list_pii_languages.

Quick start (Spanish)

import openmed

nota = (
    "El paciente Carlos Hernández (DNI 12345678Z), nacido el 11/04/1979, "
    "vive en Calle Mayor 5, Madrid. Teléfono 612 345 678."
)

result = openmed.deidentify(
    nota,
    lang="es",                # selects the Spanish PII model + ES patterns
    method="replace",         # locale-native fake values
    locale="es_ES",           # Faker locale (defaults from lang via LANG_TO_LOCALE)
)
print(result.deidentified_text)
# El paciente [surrogate name] (DNI [surrogate]), nacido el [date], ...

For German, just switch the code:

befund = "Patientin Anna Müller, geb. 11.04.1979, Steuer-ID 12 345 678 901."
result = openmed.deidentify(befund, lang="de", method="replace")

Workflow

  1. Confirm the language is supported by checking SUPPORTED_LANGUAGES.
  2. Pass lang= to deidentify/extract_pii. This selects the language-specific model (via get_pii_models_by_language) and the regex pattern set (via get_patterns_for_language) for national IDs and formats.
  3. Set locale= for surrogates when method="replace". If omitted, the locale is derived from lang through LANG_TO_LOCALE (e.g. ptpt_PT). Override for regional variants (pt_BR, en_GB, Gulf/Levant Arabic).
  4. Let accent normalization happen. For models trained on accent-free text (Spanish), deidentify auto-strips diacritics before inference and maps spans back to the original accented text. You normally do not set normalize_accents yourself.
  5. Keep surrogates stable across a document with consistent=True, seed=....

Language-specific national IDs

The pattern sets encode and the validators check real national identifier formats and checksums, so structured IDs are caught even when the model is unsure. Examples available in openmed.core.pii_i18n:

Language Identifier Validator
French NIR / INSEE validate_french_nir
German Steuer-ID validate_german_steuer_id
Italian Codice Fiscale validate_italian_codice_fiscale
Spanish DNI / NIE validate_spanish_dni, validate_spanish_nie
Dutch BSN validate_dutch_bsn
Hindi Aadhaar validate_aadhaar
Portuguese CPF / CNPJ validate_portuguese_cpf, validate_portuguese_cnpj
Turkish TCKN validate_turkish_tckn

These map to OpenMed CANONICAL_LABELS (ID_NUM, SSN) and are redacted by the same policy actions as any other identifier.

Hand-off to / from OpenMed

  • Core de-id: deidentifying-clinical-text — methods, thresholds, keep_mapping, policies (all accept lang/locale).
  • Surrogates: generating-synthetic-surrogates — locale-native fakes and custom providers per language.
  • Policies: configuring-privacy-policiespolicy= works with any lang.
  • Audit: auditing-deidentification-runs records the model and language in the no-PHI report.
  • Other surfaces: MCP openmed_deidentify / openmed_list_pii_languages; REST POST /pii/deidentify (both take a language parameter).

Edge cases & gotchas

  • Never run the English model on other languages. Recall collapses. Always pass lang=; the default model is English only.
  • langlocale. lang picks the detection model and patterns; locale shapes the replacement fakes. Set both when surrogate realism matters (e.g. lang="pt", locale="pt_BR").
  • Some locales are approximations. Faker has no Telugu locale, so OpenMed maps teen_IN and warns once. Override locale= if you need closer regional surrogates.
  • Date order varies. Day-first languages (fr, de, it, es, nl, pt, …) parse 11/04/1979 as 11 April; the date logic is language-aware — keep lang set when shifting dates.
  • Mixed-language notes (e.g. English headers in a Spanish chart) may lower recall; verify residual risk with audit=True and consider a second pass.
  • No raw PHI in logs regardless of language — offsets, labels, hashes only.

Standards & references

  • HIPAA de-identification, 45 CFR 164.514(b) (US) and GDPR / national DPAs for EU subjects: https://www.hhs.gov/hipaa/for-professionals/privacy/special-topics/de-identification/index.html
  • National ID format references are encoded in OpenMed validators (no external registry bundled).
  • OpenMed source: openmed/core/pii_i18n.py (SUPPORTED_LANGUAGES, get_patterns_for_language, validators), openmed/core/model_registry.py (get_pii_models_by_language), openmed/core/anonymizer/locales.py (LANG_TO_LOCALE).

Version History

  • f213557 Current 2026-07-23 00:44

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