authoring-model-cards
GitHub为OpenMed临床NER或去标识化模型生成符合治理要求的Model Card。基于评估输出(发布门控、公平性、错误报告)自动填充预期用途、定量指标、亚组性能及限制,并包含医疗器械免责声明,用于临床AI透明度与合规文档。
Trigger Scenarios
Install
npx skills add maziyarpanahi/openmed --skill authoring-model-cards -g -y
SKILL.md
Frontmatter
{
"name": "authoring-model-cards",
"license": "Apache-2.0",
"metadata": {
"pairs": "after",
"project": "OpenMed",
"version": "1.0",
"category": "evaluation-quality"
},
"description": "Generate a model card for an OpenMed clinical NER or de-identification model documenting intended use, quantitative metrics, subgroup performance, limitations, and a medical-device disclaimer for clinical AI governance. Use when the user wants to write or update a model card, a README model section, or governance documentation, or to turn OpenMed eval outputs (release gate report, fairness_report, error_report) into the card's metrics and limitations sections. Trigger on \"model card\", \"intended use\", \"model documentation\", \"governance\", \"limitations section\", \"datasheet\", or \"FDA\/ONC transparency\" for an OpenMed model."
}
Authoring Model Cards
A model card is the honest spec sheet for a model: what it's for, how well it works, where it breaks, and who it might fail. For clinical models this is governance-critical — an undocumented de-id model is one nobody can sign off on. This skill fills a model card directly from OpenMed eval outputs so the numbers are reproducible, not aspirational.
When to use this skill
- You're publishing or updating an OpenMed model and need its card.
- You have eval artifacts (
GateReport,fairness_report,error_report) and need to turn them into intended-use, metrics, and limitations sections. - A clinical AI governance / model-risk review needs a transparency document.
Run the evals first (see evaluating-with-leakage-gates,
benchmarking-clinical-ner, auditing-subgroup-fairness); this skill documents
their results — it does not generate the numbers.
Card sections (Mitchell et al., + clinical extensions)
See references/model-card-sections.md for the full section-to-source map. The
load-bearing sections for an OpenMed model:
- Model details — repo id, family, tier, format, params, milestone, license
(Apache-2.0). Pull from the
GateReportidentity fields. - Intended use — the clinical task and the deployment envelope.
- Out-of-scope / misuse — explicitly: not a medical device; not for autonomous clinical decisions; de-id is verified, not assumed.
- Metrics — entity-level P/R/F1 and, for de-id, residual leakage + per-label recall floors and the gate decision.
- Quantitative analysis (subgroups) — per-group leakage/recall from
fairness_report, including which groups lack data. - Limitations — error patterns from
error_report; calibration assumptions. - Caveats & disclaimer — the medical-device disclaimer.
Quick start — fill the card from eval outputs
from openmed.eval import (
run_suite, ReleaseGate, fairness_report, error_report,
)
report = run_suite("eval/gold/test.json", suite="golden",
model_name="OpenMed/Privacy-PII-Detection", device="cpu",
metadata={"family": "PII", "tier": "base",
"policy": "hipaa_safe_harbor"})
gate = ReleaseGate(milestone="v1.6", policy="hipaa_safe_harbor").evaluate(report)
fair = fairness_report("OpenMed/Privacy-PII-Detection", "golden")
errs = error_report("OpenMed/Privacy-PII-Detection", "eval/gold/test.json")
card = {
"model_details": {
"repo_id": gate.repo_id, "family": gate.family, "tier": gate.tier,
"format": gate.format, "license": "Apache-2.0",
},
"metrics": {
"exact_span_f1": report.metrics["exact_span_f1"]["f1"],
"residual_leakage_rate": gate.residual_leakage_rate,
"critical_leakage_count": gate.critical_leakage_count,
"per_label_recall": dict(gate.per_label_recall),
"release_decision": gate.decision, # RELEASABLE / QUARANTINED
},
"subgroup_analysis": fair.to_dict(), # per-group leakage/recall
"limitations": errs.to_dict()["confusion_matrix"],
}
# Render `card` into Markdown front matter + body (or the HF card template).
error_report and fairness_report carry no plaintext PHI (offsets + hashes),
so their output is safe to paste into a public card.
Workflow
- Gather artifacts. Gate report, fairness report, error report — all from a pinned model + synthetic eval set.
- Fill model details from the
GateReportidentity fields so the card,models.jsonl, and the README cannot drift (the gate'smanifest_coherenceandmodel_cardchecks enforce this). - Write intended use narrowly. Name the clinical task, language(s), and the deployment envelope. Over-broad intended-use is the most common card failure.
- State out-of-scope and the disclaimer plainly (see template below).
- Report metrics with their floors. For de-id, lead with leakage and the gate decision, not F1.
- Report subgroups honestly, including the documentation gap: if race/ ethnicity isn't available, say so rather than implying parity.
- List limitations from real errors, not boilerplate — cite the confusion matrix's worst cells.
Disclaimer block (paste & adapt)
This model assists clinical text processing and is not a medical device. It does not make autonomous clinical decisions. De-identification output must be independently verified before any data is shared; residual PHI risk is never zero. Validate on your own population before deployment.
Hand-off to / from OpenMed
- From
evaluating-with-leakage-gates(GateReport),benchmarking-clinical-ner(error_report), andauditing-subgroup-fairness(fairness_report): these are the card's evidence. - To
building-with-openmed/models.jsonl: keep card front matter (license, task, languages) coherent with the manifest — the gate checks it. - Pairs with
gating-deid-leakage: cite the green gate as the card's release evidence.
Edge cases & gotchas
- Don't claim numbers you can't reproduce. Every metric in the card should trace to an eval artifact and a pinned eval-set hash.
- Intended use ≠ capability. Document the supported envelope; mark everything else out-of-scope.
- Subgroup silence is a finding. Omitting race because it wasn't collected is itself a limitation to state — don't let absence read as equity.
- Card/manifest drift fails the gate. License/task/language mismatches between
the card and
models.jsonltripmanifest_coherence. - No raw PHI examples. Use the offset/hash examples from
error_report; never paste real patient strings as "qualitative examples". - Quantized variants need their own line. Report INT8/INT4 recall deltas (G4) per format; don't reuse the fp32 numbers.
Standards & references
- Mitchell et al., Model Cards for Model Reporting (FAT* 2019): https://arxiv.org/abs/1810.03993
- Hugging Face model card spec & template: https://huggingface.co/docs/hub/model-cards
- Sendak et al., Presenting machine learning model information to clinical end users (clinical "model facts" label): https://doi.org/10.1038/s41746-020-0253-3
- FDA, Clinical Decision Support Software guidance: https://www.fda.gov/regulatory-information/search-fda-guidance-documents/clinical-decision-support-software
- Section-to-source map:
references/model-card-sections.md.
Version History
- f213557 Current 2026-07-23 00:43


