Agent Skillsaiming-lab/AutoResearchClaw › scientific-visualization

scientific-visualization

GitHub

提供科研级图表设计指南,涵盖 matplotlib/seaborn 绘图规范、期刊尺寸标准、色盲友好配色及统计标注,确保出版级质量。

.claude/skills/scientific-visualization/SKILL.md aiming-lab/AutoResearchClaw

触发场景

创建用于期刊投稿的科学图表 优化数据可视化以符合出版标准

安装

npx skills add aiming-lab/AutoResearchClaw --skill scientific-visualization -g -y
更多选项

非标准路径

npx skills add https://github.com/aiming-lab/AutoResearchClaw/tree/main/.claude/skills/scientific-visualization -g -y

不安装直接使用

npx skills use aiming-lab/AutoResearchClaw@scientific-visualization

指定 Agent (Claude Code)

npx skills add aiming-lab/AutoResearchClaw --skill scientific-visualization -a claude-code -g -y

安装 repo 全部 skill

npx skills add aiming-lab/AutoResearchClaw --all -g -y

预览 repo 内 skill

npx skills add aiming-lab/AutoResearchClaw --list

SKILL.md

Frontmatter
{
    "name": "scientific-visualization",
    "metadata": {
        "author": "researchclaw",
        "version": "1.0",
        "category": "writing",
        "priority": "3",
        "references": "adapted from K-Dense-AI\/claude-scientific-skills",
        "trigger-keywords": "figure,plot,chart,visualization,matplotlib,seaborn,colorblind,publication",
        "applicable-stages": "14,17,22"
    },
    "description": "Publication-ready scientific figure design with matplotlib and seaborn. Use when creating journal submission figures with proper formatting, accessibility, and statistical annotations."
}

Scientific Visualization Best Practice

Figure Design Principles

  1. Every figure must have a clear, self-contained message
  2. Minimize chartjunk: remove gridlines, background shading, and 3D effects
  3. Use direct labeling instead of legends when possible
  4. Remove top and right spines for cleaner appearance
  5. Ensure all text is readable at final print size (minimum 6pt font)

Journal Figure Sizing

  1. Single column: 3.3-3.5 inches (85-89 mm) wide
  2. 1.5 column: 4.5-5.5 inches (114-140 mm) wide
  3. Double column / full width: 6.5-7.1 inches (165-180 mm) wide
  4. Resolution: 300 DPI minimum for raster; prefer vector formats (PDF, EPS, SVG)
  5. Check target journal author guidelines for exact specifications

Colorblind-Safe Design

  1. Use colorblind-friendly palettes: seaborn "colorblind", Okabe-Ito, viridis, cividis
  2. NEVER rely on color alone — combine with shape, pattern, or line style
  3. Avoid red-green combinations; prefer blue-orange or blue-yellow contrasts
  4. Test figures with a colorblind simulator before submission
  5. Ensure figures work in grayscale for print journals

Multi-Panel Layouts

  1. Label panels with uppercase letters: (A), (B), (C) in bold, top-left corner
  2. Use consistent axis scales across panels when comparing related data
  3. Share axes where appropriate to reduce redundancy
  4. Maintain consistent font sizes and line widths across all panels
  5. Use plt.subplots() with constrained_layout=True for automatic spacing

Statistical Annotations on Figures

  1. Show individual data points alongside summary statistics (box + strip plots)
  2. Always include error bars; specify type in caption (SEM, SD, 95% CI)
  3. Use significance brackets with stars: * p<.05, ** p<.01, *** p<.001
  4. Annotate effect sizes or key statistics directly on the figure when helpful
  5. Never use bar charts for small-n data — use dot plots or box plots instead

Export and Quality Checklist

  1. Save in vector format (PDF/SVG) for line art; TIFF/PNG for photographs
  2. Embed fonts or convert text to outlines for cross-platform consistency
  3. Verify axis labels include units in parentheses: "Time (s)", "Force (N)"
  4. Ensure figure caption fully explains all symbols, abbreviations, and panels
  5. Check that color-coded elements match between figure and caption

版本历史

  • e2e23c9 当前 2026-07-25 07:47

同 Skill 集合

.claude/skills/a-evolve/SKILL.md
.claude/skills/biology-biopython/SKILL.md
.claude/skills/chemistry-rdkit/SKILL.md
.claude/skills/hypothesis-formulation/SKILL.md
.claude/skills/literature-search/SKILL.md
.claude/skills/researchclaw/SKILL.md
.claude/skills/scientific-writing/SKILL.md
.claude/skills/statistical-reporting/SKILL.md
external/agents/Biology-Agent/skills/fba-simulator/SKILL.md
external/agents/Biology-Agent/skills/flux-analyzer/SKILL.md
external/agents/Biology-Agent/skills/gsmm-builder/SKILL.md
external/agents/Biology-Agent/skills/gsmm-validator/SKILL.md
external/agents/Biology-Agent/skills/metabolic-study-planner/SKILL.md
external/agents/Biology-Agent/skills/mfa-pipeline-orchestrator/SKILL.md
external/agents/stat_research_agent/skills/stat-research-orchestrator/SKILL.md
external/agents/stat_research_agent/skills/stat-result-validator/SKILL.md
external/agents/stat_research_agent/skills/statistical-experimental-evaluation/SKILL.md
external/agents/stat_research_agent/skills/statistical-method-design/SKILL.md
external/agents/stat_research_agent/skills/statistical-problem-formulation/SKILL.md
external/agents/stat_research_agent/skills/statistical-theory-analysis/SKILL.md
researchclaw/skills/builtin/domain/biology-biopython/SKILL.md
researchclaw/skills/builtin/domain/chemistry-rdkit/SKILL.md
researchclaw/skills/builtin/domain/cv-classification/SKILL.md
researchclaw/skills/builtin/domain/cv-detection/SKILL.md
researchclaw/skills/builtin/domain/nlp-alignment/SKILL.md
researchclaw/skills/builtin/domain/nlp-pretraining/SKILL.md
researchclaw/skills/builtin/domain/quantum-qiskit/SKILL.md
researchclaw/skills/builtin/domain/rl-policy-optimization/SKILL.md
researchclaw/skills/builtin/experiment/experimental-design/SKILL.md
researchclaw/skills/builtin/experiment/hypothesis-formulation/SKILL.md
researchclaw/skills/builtin/experiment/literature-search/SKILL.md
researchclaw/skills/builtin/experiment/meta-analysis/SKILL.md
researchclaw/skills/builtin/experiment/scientific-visualization/SKILL.md
researchclaw/skills/builtin/experiment/scientific-writing/SKILL.md
researchclaw/skills/builtin/experiment/statistical-reporting/SKILL.md
researchclaw/skills/builtin/experiment/systematic-review/SKILL.md
researchclaw/skills/builtin/tooling/data-loading/SKILL.md
researchclaw/skills/builtin/tooling/distributed-training/SKILL.md
researchclaw/skills/builtin/tooling/mixed-precision/SKILL.md
researchclaw/skills/builtin/tooling/pytorch-training/SKILL.md

元信息

文件数
0
版本
be4ba47
Hash
07ae48cf
收录时间
2026-07-25 07:47

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