Agent Skills
› openai/plugins
› hmdb-skill
hmdb-skill
GitHub用于提交紧凑的HMDB搜索请求，涵盖代谢物、蛋白质、疾病和通路。当用户需要简洁的HMDB摘要时使用，通过脚本执行REST调用并返回Markdown格式结果。
触发场景
用户询问特定代谢物的详细信息
用户查询蛋白质或疾病数据
用户需要了解特定通路信息
用户要求获取HMDB数据库的简洁摘要
安装
npx skills add openai/plugins --skill hmdb-skill -g -y
SKILL.md
Frontmatter
{
"name": "hmdb-skill",
"description": "Submit compact HMDB search requests for metabolites, proteins, diseases, and pathways. Use when a user wants concise HMDB summaries"
}
Operating rules
- Use
scripts/rest_request.pyfor all HMDB calls. - Use
base_url=https://hmdb.ca. - Search endpoints are better with
per_page=10andmax_items=10. - Keep category-specific requests narrow instead of broad searches across multiple categories at once.
- Re-run requests in long conversations instead of relying on older tool output.
- Treat displayed
...in tool previews as UI truncation, not literal request content.
Execution behavior
- Return concise markdown summaries from the script JSON by default.
- Prefer
unearth/qwith explicitquery,category, andformat=json. - If the user needs the full payload, set
save_raw=trueand report the saved file path.
Input
- Read one JSON object from stdin.
- Required fields:
base_url,path - Optional fields:
method,params,headers,json_body,form_body,record_path,response_format,max_items,max_depth,timeout_sec,save_raw,raw_output_path - Common HMDB patterns:
{"base_url":"https://hmdb.ca","path":"unearth/q","params":{"query":"serotonin","category":"metabolites","format":"json","per_page":10},"record_path":"metabolites","max_items":10}{"base_url":"https://hmdb.ca","path":"unearth/q","params":{"query":"glycolysis","category":"pathways","format":"json","per_page":10},"max_items":10}
Output
- Success returns
ok,source,path,method,status_code,warnings, and either compactrecordsor a compactsummary. - Use
raw_output_pathwhensave_raw=true. - Failure returns
ok=falsewitherror.codeanderror.message.
Execution
echo '{"base_url":"https://hmdb.ca","path":"unearth/q","params":{"query":"serotonin","category":"metabolites","format":"json","per_page":10},"record_path":"metabolites","max_items":10}' | python scripts/rest_request.py
References
- No additional runtime references are required; keep the import package limited to this file and
scripts/rest_request.py.
版本历史
- 11c74d6 当前 2026-07-19 09:38
