jama-oncology

GitHub

辅助评估肿瘤学研究是否适合投稿JAMA Oncology,涵盖期刊定位、选题匹配度、方法学证据标准及报告规范。用于稿件框架调整、期刊选择决策及拒稿风险预判,非临床建议。

Clinical-Medicine-Journal-Skills/skills/jama-oncology/SKILL.md brycewang-stanford/Awesome-Journal-Skills

Trigger Scenarios

作者指定JAMA Oncology并需进行适配性检查 需将癌症研究重构为具有临床意义的终点 在JAMA Oncology与其他肿瘤学期刊间做选择 需要了解该期刊的报告指南和拒稿预期

Install

npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-oncology -g -y
More Options

Non-standard path

npx skills add https://github.com/brycewang-stanford/Awesome-Journal-Skills/tree/main/Clinical-Medicine-Journal-Skills/skills/jama-oncology -g -y

Use without installing

npx skills use brycewang-stanford/Awesome-Journal-Skills@jama-oncology

指定 Agent (Claude Code)

npx skills add brycewang-stanford/Awesome-Journal-Skills --skill jama-oncology -a claude-code -g -y

安装 repo 全部 skill

npx skills add brycewang-stanford/Awesome-Journal-Skills --all -g -y

预览 repo 内 skill

npx skills add brycewang-stanford/Awesome-Journal-Skills --list

SKILL.md

Frontmatter
{
    "name": "jama-oncology",
    "description": "Use when targeting JAMA Oncology or deciding whether a clinical-oncology study fits this venue. Encodes the journal's fit, the cancer-trial and outcomes-research evidence bar, reporting-guideline and trial-registration requirements, JAMA Network house style, official-submission re-check, and desk-reject heuristics. Venue-fit aid only, not clinical advice."
}

JAMA Oncology (jama-oncology)

Journal positioning

JAMA Oncology is a JAMA Network specialty journal for clinical and translational oncology research aimed at a broad cancer-care readership — medical, surgical, and radiation oncologists, as well as cancer-epidemiology and outcomes researchers. It favors practice-relevant work: randomized cancer trials, comparative-effectiveness and real-world outcomes analyses, screening and prevention studies, and biomarker work tied to a clinically meaningful endpoint. It is positioned as a general oncology venue with JAMA's emphasis on absolute benefit, toxicity, and patient-centered outcomes, distinct from a society flagship such as Annals of Oncology (ESMO). Single-arm early-phase reports with no comparator, descriptive molecular series, and surrogate-only signals with weak clinical translation are a weak fit. This skill is a fit / venue-selection / re-framing aid; it is not clinical or regulatory advice and does not replace the journal's current instructions for authors. Before submitting, re-check the live JAMA Oncology author instructions.

When to trigger

  • The author names JAMA Oncology for a clinical, epidemiologic, or outcomes oncology study and wants a fit/framing check.
  • A cancer study must be re-framed around a clinically meaningful survival, toxicity, or quality-of-life endpoint for a broad oncology audience.
  • The author is choosing between JAMA Oncology, JAMA, and a society or subspecialty oncology journal (e.g., Annals of Oncology).
  • The author needs the journal's reporting-guideline, registration, and desk-reject expectations for oncology work.

Scope & topic fit

  • Randomized oncology trials (phase 2/3) reporting survival, response, toxicity, or patient-reported outcomes, including practice-de-escalation trials.
  • Comparative-effectiveness and real-world-evidence studies using cancer registries, claims, or institutional cohorts with rigorous confounding control.
  • Cancer screening, early-detection, and prevention studies with clinically meaningful endpoints and harms accounting.
  • Prognostic and predictive biomarker studies validated against an outcome, not just associated with a molecular feature.
  • Health-services, disparities, financial-toxicity, and survivorship research in oncology.
  • Pooled analyses and meta-analyses answering a focused, decision-relevant cancer question.

Method & evidence bar

  • Trials must be adequately powered with a prespecified primary endpoint; overall survival and validated surrogates are preferred, and surrogate-only endpoints need explicit justification of clinical relevance.
  • The applicable reporting guideline and checklist are required: CONSORT for trials, STROBE for observational/registry studies, PRISMA for systematic reviews, REMARK-style rigor for tumor-marker work.
  • Trials require prospective registration; registration number, protocol, and statistical-analysis plan are expected, including amendments.
  • Survival analyses must report absolute differences, hazard ratios with confidence intervals, and adequate follow-up; toxicity (graded per a standard scheme) must be reported alongside efficacy.
  • Real-world/registry claims must address immortal-time, selection, and indication bias; causal language must match the design.
  • Biomarker claims need a prespecified cut-point, an independent validation set, and reporting of analytic performance.

Structure & house style

  • JAMA Network format with a structured abstract and a Key Points box; re-check current article types (Original Investigation, Brief Report, Research Letter, etc.) and limits on the live guide.
  • The introduction frames a focused, decision-relevant cancer question; the discussion states the practice implication and net clinical benefit plainly.
  • Tables/figures follow JAMA Network statistical-reporting standards; CONSORT/STROBE flow diagrams, Kaplan-Meier curves with numbers at risk, and toxicity tables are expected where applicable.
  • Supplements carry the protocol, SAP, full toxicity and subgroup analyses, and consort/biomarker checklists.

Official-submission checklist

  • Before giving submission-ready advice, read ../../resources/source-basis.md and ../../resources/official-source-map.md; start from the ICMJE and JAMA Network anchors, then cite the current JAMA Oncology page you checked.
  • Search the live site for "JAMA Oncology instructions for authors" and follow the current version.
  • Re-check article types and word/reference/table limits, structured-abstract and Key Points format, and the JAMA Network statistical-reporting requirements.
  • Confirm trial registration, the reporting checklist (CONSORT/STROBE/PRISMA), the data-sharing statement, and protocol/SAP submission.
  • Re-check IRB/ethics and consent statements, ICMJE authorship and conflict-of-interest disclosure (industry ties are scrutinized in oncology), funding, and AI-use disclosure.
  • If the live official instructions conflict with this skill, the official instructions win.

Pre-submission self-check

  • The study answers a decision-relevant cancer question with a clinically meaningful endpoint and net-benefit framing.
  • The primary endpoint is prespecified; survival/toxicity are reported with absolute and relative measures and adequate follow-up.
  • The correct reporting checklist (CONSORT/STROBE/PRISMA) is completed and attached.
  • Trials are prospectively registered with the number in the manuscript; protocol/SAP provided.
  • Registry/real-world analyses address immortal-time, selection, and indication bias; biomarkers are independently validated.
  • IRB/consent, ICMJE disclosures (including industry funding), and a data-sharing statement are prepared.

Common desk-reject triggers

  • Single-arm early-phase reports with no comparator presented as practice-relevant.
  • Surrogate-only endpoints (e.g., response rate, PFS) framed as definitive clinical benefit without justification.
  • Registry/real-world analyses with immortal-time or indication bias and overstated causal claims.
  • Biomarker associations with no prespecified cut-point or independent validation.
  • Missing trial registration, protocol, or toxicity reporting alongside efficacy.
  • Narrow molecular or subspecialty interest better served by a society or basic-science cancer journal.

Re-routing decision

  • ESMO-society readership or European practice framing → annals-of-oncology.
  • Broadly practice-changing, top-tier cancer trial → general medicine (jama / NEJM / The Lancet in the natural-science bundle).
  • General internal-medicine relevance over oncology specialty → jama-internal-medicine.
  • Cancer imaging with an imaging-method core → radiology.
  • Surgical-oncology technique or perioperative focus → jama-surgery.

Output format

[Fit] High / Medium / Low (one-line reason)
[Target] JAMA Oncology
[Specialty tags] <2–3 closest oncology topics>
[Study design / reporting guideline] <RCT-CONSORT / registry-STROBE / review-PRISMA / biomarker-REMARK>
[Method/evidence] <does power, endpoint, registration, and validation clear the bar?>
[Top risk] <the single most likely reason for rejection>
[Official items to re-check] <article type / registration / checklist / toxicity / ethics / disclosures>
[Re-route suggestion] <if not a fit, a better-matched venue>

Version History

  • 1839142 Current 2026-07-05 12:36

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Metadata

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